pdbFun

Tutorials

1) How many SH3 domains are in the PDB?

2) How many kinases are in the PDB?

3) How can I compare two protein chains?

4) How can I compare a protein chain with a non-redundant PDB database?

5) How can I identify the ligand binding residues in a protein chain?

6) How can I search for a binding site in a non-redundant PDB?

7) How many chains contain an EF-hand or other calcium-binding residues?

8) How many active sites are not in the biggest cleft of PDB proteins?

9) How can I find a PROSITE pattern in a protein chain?

10) How can I compare a loop in my protein with all other loops in the PDB?